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| Host name | bethunois.cirad.fr |
| IP address | 194.199.235.207 |
| Location | France |
| Latitude | 48.8582 |
| Longitude | 2.3387 |
| Timezone | Europe/Paris |
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Site Inspections
Websites Listing
We found Websites Listing below when search with rice-genome-hub.southgreen.fr on Search Engine
Rice Genome Hub | BiŌkeanós
The Cocoa Genome Hub is an integrated web-based database providing centralized access to the cocoa reference genome sequences and genomic resources. This website provides genome sequence from the Nipponbare subspecies of rice and annotation of the 12 rice chromosomes. These data are available through search pages and the Genome Browser that ...
Biokeanos.comDA: 13 PA: 27 MOZ Rank: 40
Rice Genome Hub · bio.tools
An open source database(s) for genetics, genomics and functional research in rice species
Bio.toolsDA: 13 PA: 16 MOZ Rank: 30
Rice Genome Hub | Tripal
Rice Genome Hub. Site URL. https://rice-genome-hub.southgreen.fr/ For Developers Tripal on Fairsharing.org Add DOIs via Zenodo. Questions or problems with Tripal? Reach out via the Github issue queue. ...
Tripal.infoDA: 11 PA: 35 MOZ Rank: 48
SouthGreen | Improving the understanding of banana
The Banana Genome Hub is an online bioinformatics platform that facilitates the integration of several major banana datasets, including the genomes of Musa acuminata , Musa acuminata ssp. banksii, Musa acuminata ssp. burmannica, Musa acuminata ssp. zebrina, Musa balbisiana and Musa itinerans 1. The Banana Genome Hub can be used to study gene ...
Promusa.orgDA: 15 PA: 11 MOZ Rank: 29
The Banana Genome Hub - Database Commons
The study of the banana genome has been enhanced by a number of tools and resources that allows harnessing its sequence. First, we set up essential tools such as a Community Annotation System, phylogenomics resources and metabolic pathways. Then, to support post-genomic efforts, we improved banana existing systems (e.g. web front end, query …
Ngdc.cncb.ac.cnDA: 15 PA: 32 MOZ Rank: 51
Bananan Genome Hub v2
Droc G, Lariviere D, Guignon V, Yahiaoui N, This D, Garsmeur O, Dereeper A, Hamelin C, Argout X, Dufayard J-F, Lengelle J, Baurens F-C, Cenci A, Pitollat B, D'Hont A ...
Repo.mel.cgiar.orgDA: 18 PA: 25 MOZ Rank: 48
The South Green portal: a comprehensive resource for
Several Genome Hubs were released: Banana , Cassava, Cacao, Coffee , and others (e.g. Rice, Magnaporthae) are currently under development. Genome Hubs are powered by major GMOD (Generic Model Organism Database) components ( i.e. Chado, Cmap, Jbrowse, Tripal, Galaxy, Pathway tools) and complemented by resources and tools developed within the …
Sciencedirect.comDA: 21 PA: 38 MOZ Rank: 65
The Banana Genome Hub - PMC
Rice is one of the most studied crop genomes and is a model plant for monocotyledons. As banana belongs to the Zingiberales, a sister order of the Poales, a strong link with rice genome resources is extremely useful. We connected the Banana Genome Hub to OryGenesDB , an interactive tool for rice reverse genetics. OryGenesDB contains >245 000 ...
Ncbi.nlm.nih.govDA: 20 PA: 25 MOZ Rank: 52
Rice bioinformatics in the genomic era: Status and perspectives
Rice Genome Hub – France: Genomics and genetics data: Tools to browse, visualize and search among all data sets available: https://rice-genome-hub.southgreen.fr/ Jan. 2019: Agret et al. eRice: Epigenomic & Genomic Annotation Database for Rice: China: Reference genome 93–11; DNA methylation; N6-methyldeoxyadenosine (6 mA)
Sciencedirect.comDA: 21 PA: 38 MOZ Rank: 67
South Green - catalogue.france-bioinformatique.fr
Https://cocoa-genome-hub.southgreen.fr/ last_update Jan. 22, 2020, 10:31 a.m. more... Description. The Cocoa Genome Hub is an integrated web-based database providing centralized access to the cocoa reference genome sequences and genomic resources. Coffee Genome Hub. biotoolsID Coffee_Genome_Hub homepage https://coffee-genome-hub.southgreen.fr/ …
Catalogue.france-bioinformatique.frDA: 35 PA: 24 MOZ Rank: 68
(PDF) The Cassava Genome Hub - researchgate.net
The Cassava Genome Hub. January 2018; Conference: Proceedings Plant and Animal Genome XXVI Conference, 2018 PAG; At: San Diego; Authors: Anestis Gkanogiannis. Athens University of Economics and ...
Researchgate.netDA: 20 PA: 45 MOZ Rank: 75
Genome-wide identification and characterization of glutathione S ...
M. acuminata genome has 62 GST genes that belong to nine canonical GST classes. With the pBLAST search for the M. acuminata DH Pahang v.4 genome at the Banana Genome Hub, a total of 62 GST genes were obtained. The identified GST protein sequences were validated for the presence of conserved N- and C-terminal domains through NCBI CD …
Link.springer.comDA: 17 PA: 35 MOZ Rank: 63
Tripal and Galaxy: supporting reproducible scientific ... - Oxford …
Some examples of Tripal sites include Banana Genome Hub , Cucurbit Genomics , the Genome Database for Rosaceae , Hardwood Genomics , i5k Workspace , KnowPulse , Plansosphere , the Rice Genome Hub , TreeGenes and many others. As Tripal is used by multiple data repositories, it provides a unique opportunity for Tripal site developers to share …
Academic.oup.comDA: 16 PA: 50 MOZ Rank: 82
The cocoa genome hub, an integrated platform to access the …
The cocoa genome hub, an integrated platform to access the Criollo genome V2. In : Booklet of abstracts of the first International Symposium on Cocoa Research ISCR 2017. ICCO. Lima : ICCO, Résumé, 214-215.
Agritrop.cirad.frDA: 17 PA: 8 MOZ Rank: 38
Tripal, a community update after 10 years of ... - Oxford Academic
The Main Lab hosts five major biological data portals: the Genome Database for Rosaceae (GDR), the Citrus Genome Database (CGD), the Pulse Crop Database (PCD), the Genome Database for Vaccinium (GDV) and CottonGen. Reliance on Tripal reduces developer time per site and enables modules developed for one to be quickly shared with the others. …
Academic.oup.comDA: 16 PA: 33 MOZ Rank: 63
The coffee genome hub: a resource for coffee genomes
NucleicAcidsResearch,2015,Vol.43,Databaseissue D1029 inimplementingthishubwastoexploit,wheneverpossi-ble,interconnectedgenericsoftwaresolutionstoestablish
Researchgate.netDA: 20 PA: 50 MOZ Rank: 35
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