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| Host name | select.cirad.fr |
| IP address | 193.51.117.74 |
| Location | Paris France |
| Latitude | 48.8543 |
| Longitude | 2.3527 |
| Timezone | Europe/Paris |
| Postal | 75011 |
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OryGenesDB a database for rice reverse genetics - CIRAD
Genome Browser (Gbrowse), a Web-based application for displaying genomic annotations and other features, is the core of our database. The reference annotation layer consists in the 12 rice pseudomolecules (Version 7.0, 0ctober 2011). All the data are superposed as annotations layers and positioned with respect to these pseudomolecules.
Orygenesdb.cirad.frDA: 19 PA: 19 MOZ Rank: 20
OryGenesDB: A database for rice reverse genetics : [P355]
Droc Gaëtan, Ruiz Manuel, Larmande Pierre, Pereira Andy, Piffanelli Pietro, Morel Jean-Benoit, Dievart Anne, Courtois Brigitte, Guiderdoni Emmanuel, Perin Christophe.2005.OryGenesDB: A database for rice reverse genetics : [P355]. In : 5th International Rice Genetics Symposium (A platform for exploring developments in rice genetics and their applications) and 3rd …
Agritrop.cirad.frDA: 17 PA: 8 MOZ Rank: 26
OryGenesDB: a database for rice reverse genetics - PubMed
We have developed OryGenesDB (http://orygenesdb.cirad.fr/), a database dedicated to rice reverse genetics. Insertion mutants of rice genes are catalogued by Flanking Sequence Tag (FST) information that can be readily accessed by this database. Our database presently contains 44166 FSTs generated by most of the rice insertional mutagenesis projects.
Pubmed.ncbi.nlm.nih.govDA: 23 PA: 10 MOZ Rank: 35
Oryza Tag Line - CIRAD
Oryza Tag Line consists in a searchable database integrating phenotypic data resulting from the evaluation of the Génoplante rice insertion line library.To display the sequence information (Flanking Sequence Tags) resulting from the molecular characterization of the mutagen insertion sites in the collection, Oryza Tag Line is linked to OryGenesDB a GGB-derived interface.
Oryzatagline.cirad.frDA: 21 PA: 10 MOZ Rank: 34
OryGenesDB: A database for rice reverse genetics - Agritrop
The toolbox integrated in our database also includes an 'anchoring' option that allows immediate mapping and visualization of up to 50 nucleic acid sequences in the rice Genome Browser of OryGenesDB. As a first step toward plant comparative genomics, we have linked the rice and Arabidopsis whole genome using all the predicted pairs of orthologs by best BLAST mutual hit …
Agritrop.cirad.frDA: 17 PA: 8 MOZ Rank: 29
OryGenesDB: a database for rice reverse genetics | Nucleic Acids ...
We have developed OryGenesDB ( http://orygenesdb.cirad.fr/ ), a database dedicated to rice reverse genetics. Insertion mutants of rice genes are catalogued by Flanking Sequence Tag (FST) information that can be readily accessed by this database.
Academic.oup.comDA: 16 PA: 36 MOZ Rank: 57
OryGenesDB: a database for rice reverse genetics - PMC
We have developed OryGenesDB ( http://orygenesdb.cirad.fr/ ), a database dedicated to rice reverse genetics. Insertion mutants of rice genes are catalogued by Flanking Sequence Tag (FST) information that can be readily accessed by this database.
Ncbi.nlm.nih.govDA: 20 PA: 25 MOZ Rank: 51
CIRAD
CIRAD ¦ TropGeneDB ¦ OryGenesDB ¦ Genoplante: Phenotype ¦ Keyword ¦ Expression ¦ Advanced ¦ Line ID ¦ Ontology ID ¦ About ¦ Contact ¦ Order Seeds ¦ Links ¦ Help: Home > Line ID : Search for a single line : Search for several lines : Centre de coopération internationale en recherche agronomique pour le développement ©CIRAD 2012 - oryzatagline [at] cirad [dot] fr …
Oryzatagline.cirad.frDA: 21 PA: 23 MOZ Rank: 51
Oryza Tag Line
OryGenesDB ¦ Genoplante ... UMR DAP CIRAD TA A 96/03 - Avenue Agropolis - 34398 Montpellier Cedex 5, France 2) Inra-Ensam, UMR1096 PIA, Avenue Agropolis, F-34398 Montpellier Cedex 5, France, emmanuel.guiderdoni [at] cirad.fr 3) Genetrop, Ird, UMR 5096, BP64501, F-34394 Montpellier Cedex 5, France, alain.ghesquiere [at] mpl.ird.fr 4) Laboratoire …
Oryzatagline.cirad.frDA: 21 PA: 12 MOZ Rank: 41
OryGenesDB 2008 update: database interoperability for functional ...
OryGenesDB ( http://orygenesdb.cirad.fr/index.html) is a database developed for rice reverse genetics. OryGenesDB contains FSTs (flanking sequence tags) of various mutagens and functional genomics data, collected from both …
Ncbi.nlm.nih.govDA: 20 PA: 25 MOZ Rank: 54
Oryza Tag Line
For any help or question please send a mail to insertionlines.crb [at] cirad.fr. IMPORTANT : Following recent restrictions on the diffusion of the bar gene by the Bayer company, OTL lines harbouring pC4984, pC4985, and pC4987 vectors cannot be transferred to third party laboratories anymore from September 2013. Please check that the lines you order do not contain these T …
Oryzatagline.cirad.frDA: 21 PA: 10 MOZ Rank: 41
OryGenesDB 2008 update: database interoperability for functional ...
OryGenesDB (http://orygenesdb.cirad.fr/index.html) is a database developed for rice reverse genetics. OryGenesDB contains FSTs (flanking sequence tags) of various mutagens and functional genomics data, collected from both international insertion collections and the literature.
Pubmed.ncbi.nlm.nih.govDA: 23 PA: 10 MOZ Rank: 44
Oryza Tag Line
OryGenesDb (CIRAD) Reverse Genetics for Rice T-DNA Rice Insertion lines (Gyn An) Korean T-DNA rice insertion mutants Rice insertion mutant database, Tos17
Oryzatagline.cirad.frDA: 21 PA: 10 MOZ Rank: 43
OryGenesDB 2008 update: database interoperability for ... - Oxford …
Last, the integration of genomics data in OryGenesDB will continue, including new FSTs and new annotation layers. Users are also encouraged to submit proposals for interface modifications and data of interest that they want to integrate into OryGenesDB at [email protected]. SUPPLEMENTARY DATA. Supplementary data are available at NAR …
Academic.oup.comDA: 16 PA: 36 MOZ Rank: 65
OryGenesDB: a database for rice reverse genetics - Archive …
The toolbox integrated in our database also includes an 'anchoring' option that allows immediate mapping and visualization of up to 50 nucleic acid sequences in the rice Genome Browser of OryGenesDB. As a first step toward plant comparative genomics, we have linked the rice and Arabidopsis whole genome using all the predicted pairs of orthologs by best BLAST mutual hit …
Hal.archives-ouvertes.frDA: 24 PA: 13 MOZ Rank: 51
OryGenesDB: a database for rice reverse genetics
INTRODUCTION. Rice (Oryza sativa L.) has emerged as a model plant for cereal genomics particularly because of its compact genome (389 Mb) (), the smallest among graminaceous crops, and the availability of vast genetic and molecular resources.Comparative genomics, notably in cereals (), offers additional clues to the function of candidate sequences by allowing the …
Europepmc.orgDA: 13 PA: 20 MOZ Rank: 48
OryGenesDB: a database for rice reverse genetics
Insertional mutant databases containing Flanking Sequence Tags (FSTs) are becoming key resources for plant functional genomics. We have developed OryGenesDB (), a database dedicated to rice reverse genetics. Insertion mutants of rice genes are catalogued ...
Ncbi.nlm.nih.govDA: 20 PA: 32 MOZ Rank: 68
OryGenesDB: A database for rice reverse genetics : [P355] - CORE
The toolbox integrated in our database also includes an "anchoring option" that allows immediate mapping and visualization of up to 50 nucleic acid sequences in the rice Genome Browser of OryGenesDB. As a first step toward plant comparative genomics, we have linked the rice and Arabidopsis whole genome using all the predicted pairs of orthologs by best BLAST mutual hit …
Core.ac.ukDA: 10 PA: 18 MOZ Rank: 45
OryGenesDB: a database for rice reverse genetics. - Europe PMC
Europe PMC is an archive of life sciences journal literature. INTRODUCTION. Rice (Oryza sativa L.) has emerged as a model plant for cereal genomics particularly because of its compact genome (389 Mb) (), the smallest among graminaceous crops, and the availability of vast genetic and molecular resources.Comparative genomics, notably in cereals (), offers additional …
Europepmc.orgDA: 13 PA: 23 MOZ Rank: 54
OryGenesDB: a database for rice reverse genetics. - Europe PMC
INTRODUCTION. Rice (Oryza sativa L.) has emerged as a model plant for cereal genomics particularly because of its compact genome (389 Mb) (), the smallest among graminaceous crops, and the availability of vast genetic and molecular resources.Comparative genomics, notably in cereals (), offers additional clues to the function of candidate sequences …
Europepmc.orgDA: 13 PA: 21 MOZ Rank: 53
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