Omicsdi.org

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We found Websites Listing below when search with omicsdi.org on Search Engine

OmicsDI Blog

OmicsDI has implemented a unique and novel Search Engine for omics datasets including public and protected data. The OmicsDI Search Box Figure 1: OmicsDI Search Box The OmicsDI Search Box is the main component to searching in OmicsDI. The user can type a set of keywords that will enable the system to find the datasets containing those keywords. …

Blog.omicsdi.org

DA: 16 PA: 16 MOZ Rank: 17

OmicsDI · GitHub

OmicsDI Overview Repositories Projects Packages People Pinned specifications Public. Description about the resource, file formats, etc 8 5 ddi-web-app Public. Data Discovery Index Web Application TypeScript 10 13 ddiR Public. An R …

Github.com

DA: 10 PA: 8 MOZ Rank: 19

OmicsDI/ddiR: An R package to access to Omics Discovery Index …

DdiR. An R package to obtain data from the Omics Discovery Index (OmicsDI.It uses its RESTful Web Services at OmicsDI WS for that purpose.. Currently, the following domain entities are supported: Dataset as S4 objects, including methods to get them from OmicsDI by accession and as.data.frame; Publication as S4 objects, including methods to get them from OmicsDI by …

Github.com

DA: 10 PA: 13 MOZ Rank: 25

Omics Discovery Index - Metabolomics Info

The Omics Discovery Index (OmicsDI) provides a knowledge discovery framework across heterogeneous omics data (genomics, proteomics, transcriptomics and metabolomics). Most data in the Datatsets Discovery Index can be accessed programmatically using a RESTful API. The API implementation is based on the Spring Rest Framework.

Metabolomics.info

DA: 17 PA: 23 MOZ Rank: 43

specifications/OmicsDISchema.xsd at master · OmicsDI ... - GitHub

This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.

Github.com

DA: 10 PA: 50 MOZ Rank: 79

GitHub - OmicsDI/ddipy: OmicsDI Rest API client in Python

When ddipy is installed correctly it should be available on your path through the command omicsdi. This command line interface makes it possible to list all the data links and download the data itself related to an accession number. The tool has one mandatory parameter 'accession number' and several options:

Github.com

DA: 10 PA: 14 MOZ Rank: 29

GitHub - OmicsDI/xml-validator

The xml validator provide a way of validating the XML files. The current library and corresponding commandline tool provides different options for checking the quality of the files and the metadata they provide. The library is based on the rules and specifications for the OmicsDI project. The schema validation will provide a first validation of ...

Github.com

DA: 10 PA: 22 MOZ Rank: 38

ddipy · PyPI

When ddipy is installed correctly it should be available on your path through the command omicsdi. This command line interface makes it possible to list all the data links and download the data itself related to an accession number. The tool has one mandatory parameter 'accession number' and several options: omicsdi_fetcher [OPTIONS] ACC_NUMBER

Pypi.org

DA: 8 PA: 15 MOZ Rank: 30

OmicsDI XML format | BiŌkeanós

The Omics Discovery Index (OmicsDI) provides dataset discovery across a heterogeneous, distributed group of Transcriptomics, Genomics, Proteomics and Metabolomics data resources, including both open a ... PRIDE XML Format. XML submission format for the PRIDE repository at the EBI. ENA Sequence XML Schema. ENA Sequence XML Schema is a standardised XML …

Biokeanos.com

DA: 13 PA: 30 MOZ Rank: 51

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