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Evan Macosko, M.D., Ph.D. | The Pew Charitable Trusts
Research. The Macosko lab develops genomics technologies to discover pathological mechanisms underlying neuropsychiatric diseases. Recently, we invented Slide …
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Getting Started with Seurat • Seurat - Satija Lab
For new users of Seurat, we suggest starting with a guided walk through of a dataset of 2,700 Peripheral Blood Mononuclear Cells (PBMCs) made publicly available by 10X Genomics. This …
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scRNAseq-02 Annotation | Jocelyn's Blog
单细胞亚群鉴定基础 细胞异质性不同的细胞具有不同的功能、不同的表达模式或者说不同的基因组表观。 细胞的共性每个细胞都有独特的表达模式,都有自己特有的基因,同一 …
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单细胞分析十八般武艺2:LIGER - 云+社区 - 腾讯云
单细胞分析十八般武艺2:LIGER. 单细胞测序技术的发展日新月异,新的分析工具也层出不穷。. 每个工具都有它的优势与不足,在没有权威工具和流程的单细胞生信江湖里,多 …
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scCancer包:自动分析肿瘤单细胞转录组利器 - 云+社区
scCancer包是2020年 清华大学Jin Gu团队开发的一个专门用于分析肿瘤单细胞转录组的工具包。. 它集成了单细胞数据分析的基本流程 (Seurat),增添若干适合肿瘤数据特征的 …
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People - QIMA - Google Search
The lab list of my knowledge gained from (not fully completed and randomly listed): Name. Xiaole Liu. Bing Ren. Howard Chang. Chris Benner. Chris Glass. Wei Wang. Amos Tanay.
Sites.google.comDA: 16 PA: 24 MOZ Rank: 45
Method: LIGER - GitHub Pages
This page displays information for the following method: Name: LIGER. Description: Integrative non-negative matrix factorisation. GitHub: MacoskoLab/liger.
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scCancer包:自动分析肿瘤单细胞转录组利器 - 简书
scCancer包是2020年 清华大学Jin Gu团队开发的一个专门用于分析肿瘤单细胞转录组的工具包。. 它集成了单细胞数据分析的基本流程 (Seurat),增添若干适合肿瘤数据特征的 …
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Genesis top WordPress theme by StudioPress - macoskolab.com
Genesis top WordPress theme by StudioPress - macoskolab.com. The industry standard for Premium WordPress Themes. WordPress Themes and Plugins - Genesis,Macosko,Team …
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单细胞测序数据整合中的批次效应 - 徐洲更的第二大脑
我们更关注的一类批次效应,其实是不同实验室,不同建库手段,不同测序平台所引起的批次效应。. 当我们希望通过合并同一组织数据挖掘出更有意义的信息时,就不可避免的会发现,明明 …
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MacoskoLab/liger: Linked Inference of Genomic Experimental ...
install.packages("remotes") remotes::install_github("MacoskoLab/liger") MacoskoLab/liger documentation built on Dec. 13, 2021, 11:02 p.m. R Package …
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Macosko WordPress page template by Jeff Matson
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Code Ocean
Notes. The tools packed as packages are tested in Code Oceans. In the manuscript, the test environment is under R (v3.6.3), while the Code Ocean only provides R (v3.6.0). RPCI …
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Single-cell genomic profiling of human dopamine neurons …
The authors used single-cell genomics to profile thousands of human dopamine neurons and identify one uniquely Parkinson’s disease-susceptible population, which was …
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R Liger :: Anaconda.org
Conda install. linux-64 v1.0.0. osx-64 v1.0.0. To install this package with conda run: conda install -c bioconda r-liger.
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devtools::install_github failing in R4.0.03 - Stack Overflow
I upgraded recently to R4.0.3 and devtools::install_github no longer seems to work. E.g.. > install_github('MacoskoLab/liger') Using github PAT from envvar GITHUB_PAT …
Stackoverflow.comDA: 17 PA: 50 MOZ Rank: 93
Highly sensitive spatial transcriptomics at near-cellular resolution ...
Measurement of the location of molecules in tissues is essential for understanding tissue formation and function. Previously, we developed Slide-seq, a technology that enables …
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U19 - Huang - Brain Cell Data Center (BCDC) - BICCN
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Highly sensitive spatial transcriptomics at near-cellular resolution ...
An improved method for spatial transcriptomics with detection efficiency approaching that of droplet-based single-cell RNA-seq techniques.
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单细胞转录组高级分析介绍 - 简书
6.单细胞基因调控网络分析. 由于单细胞数据较大,细胞数目较多,因此普通单细胞转录组的共表达分析不太适合单细胞转录组数据。. 比如WGCNA是不太适合10xGenomics单细 …
Jianshu.comDA: 15 PA: 15 MOZ Rank: 49
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