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Site Inspections
Websites Listing
We found Websites Listing below when search with fishtreeoflife.org on Search Engine
The Fish Tree of Life | taxonomy, phylogenies, fossils, and more
The Fish Tree of Life. About Methods Taxonomy Fossils Downloads. Quick links. Visualize our fossil calibration points; Download the time-calibrated phylogeny ; Browse our new “Phylogenetic Fish Classification” The Fish Tree of Life. Jonathan Chang [email protected] jonchang ...
Fishtreeoflife.orgDA: 18 PA: 18 MOZ Rank: 19
Interface to the Fish Tree of Life API • fishtree
Fishtree The goal of fishtree is to provide an easy interface in R to the Fish Tree of Life API, to download taxonomies, phylogenies, diversification rate information, and other data for ray-finned fishes. It should seamlessly integrate with the rest of the R ecosystem, especially the package ape. Example See a list of taxa available to download.
Fishtree.fishtreeoflife.orgDA: 27 PA: 27 MOZ Rank: 29
GitHub - jonchang/fishtreeoflife.org: Website for the fish …
Tweak skeletal tree wording 2 years ago README.md The Fish Tree of Life website This is the primary git repository for the Fish Tree of Life website at https://fishtreeoflife.org. Data sources are hosted in the Docker repository. Building
Github.comDA: 10 PA: 28 MOZ Rank: 40
FishLife
Synopsis: This project will complete the tree of life of all living and fossil fishes, from the early evolutionary radiation of vertebrates to the extraordinary diversity of fishes. This explicit phylogenetic framework will be used for integrating genomic, paleontological, anatomical, functional, and ecological, data with comparative approaches.
Fishtree.orgDA: 16 PA: 16 MOZ Rank: 20
A New Fish Tree Of Life - Reefs.com
As we’ll soon see, the vast majority of fish families found in the aquarium trade come from a relatively small branch of the larger fish tree of life… but it just so happens that this small branch is exceedingly diverse. This is actually a fairly …
Reefs.comDA: 9 PA: 20 MOZ Rank: 33
Chondrichthyan Tree of Life
Chimaeriformes (50) Hexanchiformes (7) Echinorhiniformes (2) Pristiophoriformes (7) Squatiniformes (20) Squaliformes (121) Heterodontiformes (9) Orectolobiformes (42) Lamniformes (15) Carcharhiniformes (282) Rajiformes (293) Torpediniformes (74) Rhinopristiformes (59) Myliobatiformes (217) Lock Delete Focus Colours. Contact: Gavin Naylor.
Sharksrays.orgDA: 14 PA: 14 MOZ Rank: 20
Introducing fishtree and fishtreeoflife.org – Methods Blog
The Fish Tree of Life website is intended to serve as a quick resource for when you need to look up information about ray-finned fishes. There are two primary types of pages on the website: taxonomy pages and fossil pages.
Methodsblog.comDA: 15 PA: 21 MOZ Rank: 42
Introducing fishtree and fishtreeoflife.org · Jonathan Chang
The Fish Tree of Life website is intended to serve as a quick resource for when you need to look up information about ray-finned fishes. There are two primary types of pages on the website: taxonomy pages and fossil pages.
Jonathanchang.orgDA: 17 PA: 50 MOZ Rank: 43
Home [birdtree.org]
This website accompanies the following studies: The global diversity of birds in space and time W. Jetz, G. H. Thomas, J. B. Joy, K. Hartmann, A. O. Mooers Nature ...
Birdtree.orgDA: 12 PA: 12 MOZ Rank: 21
Taxonomy - Bird Tree
Birdlife taxonomy V5 recognizes 9,935 extant species compared to 9,895 in V3. 45 additional species not considered extinct were reviewed in Birdlife V5 compared to V3. Of these 4 were new discoveries and 41 were splits from species in V3. Jetz, W., G. H. Thomas, J. B. Joy, K. Hartmann, and A. O. Mooers. 2012. The global diversity of birds in ...
Birdtree.orgDA: 12 PA: 10 MOZ Rank: 31
GitHub - jonchang/fishtree: The R interface to the Fish Tree of Life
Fishtree The goal of fishtree is to provide an easy interface in R to the Fish Tree of Life API, to download taxonomies, phylogenies, diversification rate information, and other data for ray-finned fishes. It should seamlessly integrate with the rest of the R ecosystem, especially the package ape. Example See a list of taxa available to download.
Github.comDA: 10 PA: 18 MOZ Rank: 38
A Fisheye View of the Tree of Life - Understanding Evolution
The evolutionary tree shown here focuses on relationships among the ray-finned fishes (Actinopterygii, ACK-tih-NOP-tuh-RIJ-ee-eye ). Click on the colored logos to read about evolutionary innovations and see lists of characteristics that evolved in different lineages. Note that this tree has been pruned to focus on certain groups of interest.
Evolution.berkeley.eduDA: 22 PA: 27 MOZ Rank: 60
CRAN - Package fishtree
An interface to the Fish Tree of Life API to download taxonomies, phylogenies, fossil calibrations, and diversification rate information for ray-finned fishes. fishtree: Interface to the Fish Tree of Life API. An interface to the Fish Tree of Life API to download taxonomies, phylogenies, fossil calibrations, and diversification rate information for ray-finned fishes. Version: 0.3.4: Depends: …
Cran.r-project.orgDA: 18 PA: 33 MOZ Rank: 63
Package ‘fishtree’
Downloads tip rates for the entire Fish Tree of Life, or for a specified subset. Tip rates can be thought of as an instantaneous speciation or extinction rate; for example, a higher tip-specific speciation rate might imply that a lineage is more likely to split a new lineage at the present time. See Title (2019) in references for details. If neither ‘species‘ nor ‘rank‘ are ...
Cran.r-project.orgDA: 18 PA: 35 MOZ Rank: 66
iTOL: order from fishtreeoflife.newick - EMBL
Phylogenetic tree viewer and annotation tool. Drop one or more annotation files to visualize them. Make sure to use the template files provided in the help pages.
Itol.embl.deDA: 12 PA: 32 MOZ Rank: 58
Switches, stability and reversals in the evolutionary history of …
Data were extracted from primary literature and FishBase (www.fishbase.org); the phylogenetic tree 61 is available at https://fishtreeoflife.org. All data …
Nature.comDA: 14 PA: 28 MOZ Rank: 57
A fisheye view of the tree of life - Reef Success
Check out A fisheye view of the tree of life. After you click over to the website, you can mouse over the different parts of the tree for solid answers to questions such as: What is a fish? Why are humans in the fish tree? What are googly-eyed fish? This is part of U.C. Berkeley’s excellent (if a little dated) Understanding Evolution website.
Reefsuccess.comDA: 15 PA: 47 MOZ Rank: 78
fishtree package - RDocumentation
Fishtree The goal of fishtree is to provide an easy interface in R to the Fish Tree of Life API, to download taxonomies, phylogenies, diversification rate information, and other data for ray-finned fishes. It should seamlessly integrate with the rest of the R ecosystem, especially the package ape. Example See a list of taxa available to download.
Rdocumentation.orgDA: 22 PA: 33 MOZ Rank: 72
Resolving the ray-finned fish tree of life | PNAS
Hughes et al. introduce a pipeline that expands the genomic resources for phylogenetic inference in fishes by identifying and extracting 1,105 protein coding genes from genomic alignments.Inferring the ray-finned fish tree of life using phylogenomic data is potentially confounded by two episodes of genomic expansion in the history of the group (15, 16): one at …
Pnas.orgDA: 12 PA: 28 MOZ Rank: 58
fishtree: Interface to the Fish Tree of Life API
fishtree: Interface to the Fish Tree of Life API An interface to the Fish Tree of Life API to download taxonomies, phylogenies, fossil calibrations, and diversification rate information for ray-finned fishes. Getting started
Rdrr.ioDA: 7 PA: 15 MOZ Rank: 41
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