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Host Informations
| Host name | sparql.rhea-db.org |
| IP address | 192.33.215.78 |
| Location | Switzerland |
| Latitude | 47.1449 |
| Longitude | 8.1551 |
| Timezone | Europe/Zurich |
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We found Websites Listing below when search with covid-19-sparql.expasy.org on Search Engine
Expasy - COVID-19
A pangenome of over 100 SARS-CoV-2 genomes submitted to INDSC , built with seqwish and odgi by Erik Garrison. It is free to access and supports the SPARQL 1.1 Standard. There are 64,580,219 triples in this endpoint (2020-06-19). The query timeout is 45 minutes. All triples are available in the default graph.
Covid-19-sparql.expasy.orgDA: 26 PA: 26 MOZ Rank: 27
SIB COVID-19 Integrated Knowledgebase - expasy.org
SPARQL endpoint providing access to integrated data from various sources (incl. SIB resources). This resource supports COVID-19 / SARS-CoV-2 research. Browse the resource website Developed by the Swiss-Prot group and supported by the SIB Swiss Institute of Bioinformatics. What you can do with this resource No operations found for this resource. Browse these …
Expasy.orgDA: 14 PA: 48 MOZ Rank: 63
SIB Swiss Institute of Bioinformatics | Expasy
Operated by the SIB Swiss Institute of Bioinformatics, Expasy, the Swiss Bioinformatics Resource Portal, provides access to scientific databases and software tools in different areas of life sciences. Home; About; SIB News Contact; Posted Invalid Date - Explore high-quality biological data resources e.g. BLAST, UniProt, MSH6, Albumin... Filters Genes & Genomes Genomics …
Expasy.orgDA: 14 PA: 14 MOZ Rank: 17
RDF-Sparql-COVID-19/README.md at main · eddyjarjoura/RDF …
Contribute to eddyjarjoura/RDF-Sparql-COVID-19 development by creating an account on GitHub.
Github.comDA: 10 PA: 50 MOZ Rank: 66
GitHub - eddyjarjoura/RDF-Sparql-COVID-19
Contribute to eddyjarjoura/RDF-Sparql-COVID-19 development by creating an account on GitHub.
Github.comDA: 10 PA: 33 MOZ Rank: 47
ABCD - SIB Swiss Institute of Bioinformatics | Expasy
This resource supports COVID-19 / SARS-CoV-2 research. Browse the resource website Developed by the Geneva Antibody Facility at the University of Geneva, in collaboration with the CALIPHO and Swiss-Prot groups. What you can do with this resource Query and retrieval; Browse these keywords in Expasy Gene and protein families, Bioinformatics, UniProt …
Expasy.orgDA: 14 PA: 15 MOZ Rank: 34
Issues · Ayoub-Ajarra/SPARQL-Covid19 · GitHub
In this repository All GitHub All GitHub
Github.comDA: 10 PA: 35 MOZ Rank: 51
GitHub - csisc/WikidataCOVID19SPARQL: A project to visualize …
A project to visualize and validate COVID-19 information in Wikidata - GitHub - csisc/WikidataCOVID19SPARQL: A project to visualize and validate COVID-19 …
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GitHub - Rothamsted/covid19-kg: Documentation for the COVID …
Documentation for the COVID-19 KnetGraph SPARQL and Cypher endpoints - GitHub - Rothamsted/covid19-kg: Documentation for the COVID-19 …
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Expasy, the Swiss Bioinformatics Resource Portal, as designed by …
Expasy allows users to search for resources by name, keyword, category or description. When a user, for example, types ‘virus’ in the search bar, this results in a list of virus-related databases and software tools, such as V-pipe , ViralZone , OpenFlu or COVID-19 Scenarios . We will refer to ‘regular search’ in the rest of the article ...
Academic.oup.comDA: 16 PA: 31 MOZ Rank: 56
HAMAP - SIB Swiss Institute of Bioinformatics | Expasy
HAMAP is applied to bacterial, archaeal and eukaryotic proteins and used to annotate records in UniProtKB via UniProt's automatic annotation pipeline. This resource supports COVID-19 / SARS-CoV-2 research. Developed by the Swiss-Prot group and supported by the SIB Swiss Institute of Bioinformatics. This resource is released under a Creative ...
Expasy.orgDA: 14 PA: 16 MOZ Rank: 40
Knowledge-Graph-Hub/kg-covid-19 - github.com
An instance of KG Hub to produce a knowledge graph for COVID-19 response. - Knowledge-Graph-Hub/kg-covid-19
Github.comDA: 10 PA: 50 MOZ Rank: 39
Events | Universität Tübingen - uni-tuebingen.de
The pragmatic bottom up choice by a number of SIB groups is to use RDF and SPARQL to achieve more Interoperable and Reusable data resources. RDF is a knowledge representation framework, while SPARQL is a graph query language that allows for federated querying. There will be a demonstration using Rhea, Hamap and UniProt as examples of how this plays out in …
Uni-tuebingen.deDA: 16 PA: 50 MOZ Rank: 38
GlyConnect - Expasy
Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2 # Export GlyConnect protein list related to peptides with id 7000 P0DTC2 # id : 2840 Recombinant Spike glycoprotein (FreeStyle 293-F) Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
Glyconnect.expasy.orgDA: 21 PA: 23 MOZ Rank: 57
Structure - glyconnect.expasy.org
Disease; COVID-19 (DOID:0080600) ; Reference; Structural and functional characterization of SARS-CoV-2 RBD domains produced in mammalian cells (2021 - Christoph Gstöttner, Tao Zhang, Anja Resemann, Sophia Ruben, Stuart Pengelley, Detlev Suckau, Tim Welsink, Manfred Wuhrer, Elena Domínguez-Vega) / Status : Reviewed Site-specific N-glycosylation …
Glyconnect.expasy.orgDA: 21 PA: 25 MOZ Rank: 60
LIVNNATNVVIK (12aa) - glyconnect.expasy.org
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) Protein Recombinant Spike glycoprotein (BTI-Tn-5B1-4) / Severe acute respiratory syndrome coronavirus 2 …
Glyconnect.expasy.orgDA: 21 PA: 23 MOZ Rank: 59
GlyConnect - Expasy
Recombinant Spike glycoprotein (HEK293) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2 # Export GlyConnect protein list related to peptides with id 5529 P0DTC2 # id : 2839 Recombinant Spike glycoprotein (BTI-Tn-5B1-4) Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2 # id : 2838 Recombinant Spike glycoprotein (HEK293) …
Glyconnect.expasy.orgDA: 21 PA: 23 MOZ Rank: 60
Hex:6 HexNAc:3 - glyconnect.expasy.org
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) Protein ; Angiotensin-converting enzyme 2 / Homo sapiens Q9BYF1; Recombinant Spike glycoprotein (BTI-Tn-5B1-4) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2
Glyconnect.expasy.orgDA: 21 PA: 26 MOZ Rank: 64
Enabling semantic queries across federated bioinformatics
To solve the syntactic heterogeneity, we rely on a structured query language—SPARQL—as the homogenous syntax to query all the data ().We favoured SPARQL 1.1 over alternatives because it is World Wide Web Consortium (W3C) compliant, and the data to be integrated are on the web; because it supports federated queries; and because one of our …
Europepmc.orgDA: 13 PA: 21 MOZ Rank: 52
HAMAP rules as SPARQL A portable annotation pipeline for …
We have translated the rules of our HAMAP proteome annotation pipeline to queries in the W3C standard SPARQL 1.1 syntax and applied them with two off-the-shelf SPARQL engines to UniProtKB/Swiss-Prot protein sequences described in RDF format. This approach is applicable to any genome or proteome annotation pipeline and greatly simplifies their reuse.
Europepmc.orgDA: 13 PA: 22 MOZ Rank: 54
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