Bioexcel-cv19.bsc.es

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Bioexcel-cv19


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Resources | COVID-19 Data Portal Spain

BioExcel-Covid19 (BioExcel-CV19) Developed by Molecular Modeling and Bioinformatics unit, IRB Barcelona and INB/ELIXIR-ES Computational node, BSC. Resource developed as part of the BioExcel CoE. Platform designed to provide web-access to atomistic-MD trajectories for macromolecules involved in the COVID-19 disease.

Covid19dataportal.es

DA: 20 PA: 11 MOZ Rank: 31

Periodic Reporting for period 1 - BioExcel-2 (BioExcel-2 …

BioExcel Centre of Excellence for ComputationalBiomolecular Research. Rapports ...

Cordis.europa.eu

DA: 16 PA: 31 MOZ Rank: 48

Periodic Reporting for period 1 - BioExcel-2 (BioExcel-2 …

Computing is a critical resource for high-impact research and commercial applications, in particular in Life Sciences. Exascale computer...

Cordis.europa.eu

DA: 16 PA: 31 MOZ Rank: 49

Periodic Reporting for period 1 - BioExcel-2 (BioExcel-2 …

BioExcel Centre of Excellence for ComputationalBiomolecular Research. Berichterstattung ...

Cordis.europa.eu

DA: 16 PA: 31 MOZ Rank: 50

Periodic Reporting for period 1 - BioExcel-2 (BioExcel-2 …

BioExcel Centre of Excellence for ComputationalBiomolecular Research. Sprawozdania ...

Cordis.europa.eu

DA: 16 PA: 31 MOZ Rank: 51

SCoV2-MD: a database for the dynamics of the SARS-CoV …

Abstract. SCoV2-MD (www.scov2-md.org) is a new online resource that systematically organizes atomistic simulations of the SARS-CoV-2 proteome.The database includes simulations produced by leading groups using molecular dynamics (MD) methods to investigate the structure-dynamics-function relationships of viral proteins.

Academic.oup.com

DA: 16 PA: 31 MOZ Rank: 52

Barcelona Supercomputing Center – Centro Nacional de ... - res.es

El Comité de Acceso del Barcelona Supercomputing Center – Centro Nacional de Supercomputación es un órgano asesor del Director que informará las solicitudes de acceso al Centro de los investigadores y grupos de investigación que lo soliciten. El Comité propondrá al Director, en base a la calidad científica y

Res.es

DA: 10 PA: 50 MOZ Rank: 44

The binding of heparin to spike glycoprotein inhibits SARS-CoV-2 ...

Heparin, a naturally occurring glycosaminoglycan, has been found to have antiviral activity against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative virus of COVID-19. To elucidate the mechanistic basis for the antiviral activity ...

Ncbi.nlm.nih.gov

DA: 20 PA: 25 MOZ Rank: 52

FAIR sharing of molecular visualization experiences: from pictures …

The Covid-19 pandemic has spurred a wealth of new structural biology data related to the severe acute respiratory syndrome coronavirus (SARS-CoV)-2 retrovirus and its interactions with other macromolecules involved in the …

Biorxiv.org

DA: 15 PA: 45 MOZ Rank: 68

SCoV2-MD: a database for the dynamics of the SARS-CoV-2 …

NucleicAcidsResearch,2022,Vol.50,Databaseissue D861 Figure 2. PhylogenetictreeofSARS-CoV-2viralevolution.Sequencedsamples(isolates)aremappedontothetree ...

Repositori.upf.edu

DA: 18 PA: 50 MOZ Rank: 77

Mechanism of reaction of RNA-dependent RNA polymerase from …

The data that support the plots within this paper are available from the corresponding authors upon request. Trajectories will be deposited in the BIOEXCEL-COVID-19 database: https://bioexcel-cv19.bsc.es and will be accesible upon publication.

Sciencedirect.com

DA: 21 PA: 38 MOZ Rank: 69

rdmkit/main_tool_and_resource_list.csv at master - github.com

The ELSI Knowledge Base is an open-access resource platform that aims at providing practical know-how for responsible research. data protection, sensitive, policy officer, data manager, human data. Beacon. https://beacon-project.io/. The Beacon protocol defines an open standard for genomics data discovery.

Github.com

DA: 10 PA: 50 MOZ Rank: 92

Mechanism of reaction of RNA-dependent RNA polymerase from …

Trajectories will be deposited in the BIOEXCEL-COVID-19 database: https://bioexcel-cv19.bsc.es and will be accesible upon publication. Abstract We combine molecular dynamics, statistical mechanics, and hybrid quantum mechanics/molecular mechanics simulations to describe mechanistically the severe acute respiratory syndrome coronavirus 2 …

Europepmc.org

DA: 17 PA: 21 MOZ Rank: 50

BioExcel - hpccoe.eu

Training. CoE Online Training Resources; CoE Training Registry

Hpccoe.eu

DA: 13 PA: 19 MOZ Rank: 45

(PDF) The impact of structural bioinformatics tools and resources …

The BioExcel-COVID-19 portal (https://bioexcel-cv19.bsc.e s/#/ ) is an open-access initiative integrating MD simulation data generated by various groups, including the DE-Shaw group.

Researchgate.net

DA: 20 PA: 50 MOZ Rank: 36

UnityMol prototype for FAIR sharing of molecular-visualization ...

1. Introduction. The COVID-19 pandemic has spurred a wealth of new structural biology data related to the severe acute respiratory syndrome coronavirus SARS-CoV-2 and its interactions with other macromolecules involved in the development and spread of the disease (Baker, 2020; Dömling & Gao, 2020).Such structural data are transparent to experts in the …

Journals.iucr.org

DA: 17 PA: 38 MOZ Rank: 70

Supporting Information for

S-1 Supporting Information for: The binding of heparin to spike glycoprotein inhibits SARS-CoV-2 infection by three mechanisms Giulia Paiardi*1,2, Stefan Richter1, Pasqua Oreste3, Chiara Urbinati2, Marco Rusnati2, Rebecca C. Wade*1,4. 1 Molecular and Cellular Modeling Group, Heidelberg Institute for Theoretical Studies (HITS), 69118 Heidelberg, Germany.

Europepmc.org

DA: 13 PA: 33 MOZ Rank: 62

N-terminal domain mutations of the spike protein are structurally ...

The authors thank Dr. Rommie Amaro for providing Molecular Dynamics simulations trajectories and structures of the glycan shielded SARS-CoV-2 spike protein and Dr. Modesto Orozco for access to the BioExcel-CV19 platform.

Ncbi.nlm.nih.gov

DA: 20 PA: 25 MOZ Rank: 62

COVID19

The NIST COVID19-DATA repository is being made available to aid in meeting the White House Call to Action for the Nation’s artificial intelligence experts to develop new text and data mining techniques that can help the science community answer high …

Covid19-data.nist.gov

DA: 21 PA: 50 MOZ Rank: 32

BioExcel: GROMACS hackathon 2016 | Biocat

Los asistentes deberán llevar su propio portátil y un problema de codificación. Con la ayuda de "gurús" podrán salir con un nuevo código funcionando, más avanzado y mejor planificado.

Biocat.cat

DA: 14 PA: 50 MOZ Rank: 86

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